Top Entry Two Corridors Split Targets

Gallery / Inter-section Routing

A Reporting section's TOP entry is fed along two corridors: the whole-genome line over the top from Read QC and both lines climbing out of Alignment beside it. Both lines turn off to Stats and the panel line continues down to Panel coverage. The port deals its column in the order the lines turn off, so the bundle stays nested from the climb through both turns instead of the lines swapping over the top and crossing inside the entry (issue #2123).

Mermaid source

%%metro title: Whole-genome and panel sequencing
%%metro line: wgs | Whole genome | #0570b0
%%metro line: panel | Targeted panel | #d62728

graph LR
    subgraph qc [Read QC]
        fastqc[FastQC]
        fastp[fastp]
        fastqc -->|wgs,panel| fastp
    end
    subgraph align [Alignment]
        bwa[BWA-MEM]
        markdup[MarkDuplicates]
        bqsr[BQSR]
        bwa -->|wgs,panel| markdup
        markdup -->|wgs,panel| bqsr
    end
    subgraph reporting [Reporting]
        %%metro entry: top | wgs, panel
        qc_stats[Stats]
        multiqc[MultiQC]
        panel_coverage[Panel coverage]
        qc_stats -->|wgs,panel| multiqc
    end
    fastp -->|wgs,panel| bwa
    fastqc -->|wgs| qc_stats
    bqsr -->|panel| panel_coverage
    bqsr -->|wgs,panel| qc_stats

CLI command

nf-metro render examples/topologies/top_entry_two_corridors_split_targets.mmd -o top_entry_two_corridors_split_targets.svg

Rendered map