Skip to content

Riboseq Fold Two Dir Entry Hintless

A folded Ribo-seq excerpt with no `%%metro grid:`/`entry:`/`exit:` hints: P-site identification sits on the RL return row, fed from the quantification section directly above it and the ORF-calling section to its right. Entry-side inference picks a single sensible side (the flow-natural RIGHT, which a feed reaches) from the feed geometry, so the map lays out cleanly hint-free.

Mermaid source
examples/topologies/riboseq_fold_two_dir_entry_hintless.mmd
%%metro title: Riboseq Fold Two-Direction Entry (hintless)
%%metro fold_threshold: 3
%%metro line: ribo | Ribo-seq | #2db572
graph LR
subgraph prep [Prep]
p0[Trim]
end
subgraph align [Align]
a0[Align]
end
subgraph quantification [Quant]
q0[Quantify]
end
subgraph orf_calling [ORF]
o0[Call ORFs]
end
subgraph psite_id [P-site]
ps0[P-sites]
end
subgraph te [TE]
t0[TE]
end
p0 -->|ribo| a0
a0 -->|ribo| q0
q0 -->|ribo| o0
q0 -->|ribo| ps0
o0 -->|ribo| ps0
ps0 -->|ribo| t0
CLI command
Terminal window
nf-metro render examples/topologies/riboseq_fold_two_dir_entry_hintless.mmd -o riboseq_fold_two_dir_entry_hintless.svg
Rendered map
Riboseq Fold Two-Direction Entry (hintless) 1 2 3 4 5 6 Trim Align Quantify Call ORFs P-sites TE Ribo-seq created with nf-metro v1.1.0+dev