Folded Corridor Distinct Lanes

Gallery / Feature Showcase

Two distinct lines share a folded RL return corridor: they co-travel the trunk and fold drop as adjacent lanes, diverge where one line bypasses a section while the other routes through it, and reconverge at the final section. Every shared channel keeps the two lines an OFFSET_STEP apart rather than collapsing one stroke onto the other.

Mermaid source

examples/topologies/folded_corridor_distinct_lanes.mmd

%%metro title: Folded Corridor Distinct Lanes
%%metro style: dark
%%metro line: dna | DNA | #4a90d9
%%metro line: rna | RNA | #e63946
%%metro grid: preprocessing | 0,0
%%metro grid: gatk | 1,0
%%metro grid: variant_calling | 2,0
%%metro grid: normalization | 2,1
%%metro grid: consensus | 1,1
%%metro grid: realignment | 0,1

graph LR
    subgraph preprocessing [Pre-processing]
        %%metro exit: right | dna, rna
        pp1[Trim]
        pp2[Align]
        pp1 -->|dna,rna| pp2
    end
    subgraph gatk [GATK]
        %%metro entry: left | dna, rna
        %%metro exit: right | dna, rna
        gk1[BQSR]
        gk2[Apply]
        gk1 -->|dna,rna| gk2
    end
    subgraph variant_calling [Variant Calling]
        %%metro entry: left | dna, rna
        %%metro exit: bottom | dna, rna
        vc1[Call]
        vc2[Filter]
        vc1 -->|dna,rna| vc2
    end
    subgraph normalization [Normalization]
        %%metro direction: RL
        %%metro entry: top | dna, rna
        %%metro exit: left | dna, rna
        nz1[Decompose]
        nz2[Norm]
        nz1 -->|dna,rna| nz2
    end
    subgraph consensus [Consensus]
        %%metro direction: RL
        %%metro entry: right | dna
        %%metro exit: left | dna
        cs1[Merge]
        cs2[Vote]
        cs1 -->|dna| cs2
    end
    subgraph realignment [Realignment]
        %%metro direction: RL
        %%metro entry: right | dna, rna
        rl1[Realign]
        rl2[Recall]
        rl1 -->|dna,rna| rl2
    end
    pp2 -->|dna,rna| gk1
    gk2 -->|dna,rna| vc1
    vc2 -->|dna,rna| nz1
    nz2 -->|dna| cs1
    nz2 -->|rna| rl1
    cs2 -->|dna| rl1

CLI command

nf-metro render examples/topologies/folded_corridor_distinct_lanes.mmd -o folded_corridor_distinct_lanes.svg

Rendered map